BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F03LP1|AL427783
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1518 1884 0.0
>3x_Contig1518
Length = 11021
Score = 1884 bits (947), Expect = 0.0
Identities = 969/977 (99%), Gaps = 2/977 (0%)
Strand = Plus / Minus
Query: 1 gatccaagtcaatggttatatgacggkcatctaacttcgtgtcacccaagtattttatag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6765 gatccaagtcaatggttatatgacggtcatctaacttcgtgtcacccaagtattttatag 6706
Query: 61 aattcaatgcgtcttccatcttatcgaatataataaaacaaaatccacacggcgtaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6705 aattcaatgcgtcttccatcttatcgaatataataaaacaaaatccacacggcgtaaact 6646
Query: 121 tgaacctatctagacccatgataawctttwwaatggtgccacatttggagaatagctcat 180
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 6645 tgaacctatctagacccatgataatcttttttatggtgccacatttggagaatagctcat 6586
Query: 181 atatttgctcttcacttgtgtaaaacgatagattacccacataaactgtacaggatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6585 atatttgctcttcacttgtgtaaaacgatagattacccacataaactgtacaggatttca 6526
Query: 241 tagattttctcaactgttgcaatccagaatctgggtcacgtctagccttacggatcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6525 tagattttctcaactgttgcaatccagaatctgggtcacgtctagccttacggatcaaat 6466
Query: 301 aacgagagggcttatctaacctatcacaactgtgatcgtacttaatctcatcaaactccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6465 aacgagagggcttatctaacctatcacaactgtgatcgtacttaatctcatcaaactccg 6406
Query: 361 ctagagacatggtatttgcttgactgatgctagtttggggtatttggagtttatctggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6405 ctagagacatggtatttgcttgactgatgctagtttggggtatttggagtttatctggag 6346
Query: 421 ctatggtgtcttatgaacctatagattttacttaatcatttcaatcccaaatttaaagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6345 ctatggtgtcttatgaacctatagattttacttaatcatttcaatcccaaatttaaagtt 6286
Query: 481 gaatgaatctttcaagttttttttttttttccatataagccatattataagtactgaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6285 gaatgaatctttcaagttttttttttttttccatataagccatattataagtactgaata 6226
Query: 541 ctttgtgtcagtgacaggttgtgaaaaatcaaataaacaaatcgggtggacactgcatcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6225 ctttgtgtcagtgacaggttgtgaaaaatcaaataaacaaatcgggtggacactgcatcg 6166
Query: 601 aagctcttgactgctgagaaagaataataagtaactttcaattaattaaatttgagacta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6165 aagctcttgactgctgagaaagaataataagtaactttcaattaattaaatttgagacta 6106
Query: 661 tccagtggtttctctggaaaaatattgttatgcactctactttgacagaaatgattctca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6105 tccagtggtttctctggaaaaatattgttatgcactctactttgacagaaatgattctca 6046
Query: 721 atagccataagggaaatgtgggaagataccattttagaattcataacacacccccatgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6045 atagccataagggaaatgtgggaagataccattttagaattcataacacacccccatgcc 5986
Query: 781 accaagaagaataagatccctgttaaataggtgctgattgttaaaattgactacacaagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5985 accaagaagaataagatccctgttaaataggtgctgattgttaaaattgactacacaagt 5926
Query: 841 atttccaagagattcagctacatactaacaatatctgaagagaaggtttcaagtgatact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5925 atttccaagagattcagctacatactaacaatatctgaagagaaggtttcaagtgatact 5866
Query: 901 gtttccataataaaaactaatgtttgatttctattttgtatggttactatccgatatagt 960
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5865 gtttccataataaaaactaatg-ttgatttctattttgtatggttactatccgatatagt 5807
Query: 961 gt-amggctatcacatc 976
|| | ||||||||||||
Sbjct: 5806 gtaacggctatcacatc 5790
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,965
Number of Sequences: 1807
Number of extensions: 15965
Number of successful extensions: 309
Number of sequences better than 1.0e-20: 1
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)